dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02893
Location and strand information: 20389 - 21024 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase, cytochrome b556(fdo) subunit

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02894
Location and strand information: 21021 - 21926 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O iron-sulfur subunit

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02895
Location and strand information: 21939 - 24353 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O major subunit

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02896
Location and strand information: 24402 - 24989 (-)
Family: 5.A.3.2.1
Protein type: TC
Protein description: Formate dehydrogenase-O major subunit

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02897
Location and strand information: 25180 - 26004 (+)
Family: null
Protein type: null
Protein description: Sulfur carrier protein FdhD

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02898
Location and strand information: 26133 - 26345 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02899
Location and strand information: 26387 - 26710 (-)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02900
Location and strand information: 26710 - 27369 (-)
Family: 2.A.78.2.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02901
Location and strand information: 27485 - 28033 (+)
Family: HTH_3
Protein type: TF
Protein description: HTH-type transcriptional regulator SutR

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02902
Location and strand information: 28054 - 29049 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator RafR

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02903
Location and strand information: 29154 - 31277 (+)
Family: GH36
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 6.1747
Protein molecular weight: 80142.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02904
Location and strand information: 31322 - 32587 (+)
Family: 2.A.1.5.4
Protein type: TC
Protein description: Melibiose permease

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02905
Location and strand information: 32627 - 32941 (-)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02906
Location and strand information: 32968 - 33972 (-)
Family: 3.A.1.2.8
Protein type: TC
Protein description: Autoinducer 2 import system permease protein LsrD

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02907
Location and strand information: 33969 - 34973 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: D-allose transport system permease protein AlsC

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02908
Location and strand information: 34973 - 36475 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000003390_70|CGC1
Gene ID: MGYG000003390_02909
Location and strand information: 36544 - 37530 (-)
Family: 3.A.1.2.9
Protein type: TC
Protein description: Autoinducer 2-binding protein LsrB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003390_02893	Formate dehydrogenase, cytochrome b556(fdo) subunit	TC	20389	21024	-	5.A.3.2.1
MGYG000003390_02894	Formate dehydrogenase-O iron-sulfur subunit	TC	21021	21926	-	5.A.3.2.1
MGYG000003390_02895	Formate dehydrogenase-O major subunit	TC	21939	24353	-	5.A.3.2.1
MGYG000003390_02896	Formate dehydrogenase-O major subunit	TC	24402	24989	-	5.A.3.2.1
MGYG000003390_02897	Sulfur carrier protein FdhD	null	25180	26004	+	FdhD-NarQ
MGYG000003390_02898	hypothetical protein	null	26133	26345	+	YdgH_BhsA-like
MGYG000003390_02899	hypothetical protein	TC	26387	26710	-	2.A.78.2.3
MGYG000003390_02900	hypothetical protein	TC	26710	27369	-	2.A.78.2.3
MGYG000003390_02901	HTH-type transcriptional regulator SutR	TF	27485	28033	+	HTH_3
MGYG000003390_02902	HTH-type transcriptional regulator RafR	TF	28054	29049	+	LacI
MGYG000003390_02903	Alpha-galactosidase	CAZyme	29154	31277	+	GH36
MGYG000003390_02904	Melibiose permease	TC	31322	32587	+	2.A.1.5.4
MGYG000003390_02905	L-rhamnose mutarotase	null	32627	32941	-	rhaM
MGYG000003390_02906	Autoinducer 2 import system permease protein LsrD	TC	32968	33972	-	3.A.1.2.8
MGYG000003390_02907	D-allose transport system permease protein AlsC	TC	33969	34973	-	3.A.1.2.9
MGYG000003390_02908	Ribose import ATP-binding protein RbsA	TC	34973	36475	-	3.A.1.2.9
MGYG000003390_02909	Autoinducer 2-binding protein LsrB	TC	36544	37530	-	3.A.1.2.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature